Description
nuclear receptor subfamily 1, group H, member 3 [Source:HGNC Symbol;Acc:7966]
Gene Synonyms
LXR-a, LXRA, RLD-1
Location
Chromosome 11: 47,269,851-47,290,396 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 34 transcripts (splice variants) and 18 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000467728.1 | NR1H3-001 | 2731 | 447aa | ENSP00000420656.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7929 | C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 F1D8N1 Q13133 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000481889.2 | NR1H3-023 | 1704 | 466aa | ENSP00000433271.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 E9PLL4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000441012.2 | NR1H3-030 | 1637 | 447aa | ENSP00000387946.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7929 | C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 F1D8N1 Q13133 | NM_005693.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000395397.3 | NR1H3-031 | 1501 | 402aa | ENSP00000378793.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44585 | C9J2C8 Q13133 | NM_001130102.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000405853.3 | NR1H3-006 | 1480 | 387aa | ENSP00000384745.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44584 | B5MBY7 C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 E9PID2 Q13133 | NM_001130101.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000405576.1 | NR1H3-003 | 1352 | 342aa | ENSP00000385073.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5MBY7 C9J2C8 E9PID2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000407404.1 | NR1H3-002 | 1330 | 387aa | ENSP00000385801.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44584 | B5MBY7 C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 E9PID2 Q13133 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000527949.1 | NR1H3-032 | 1065 | 296aa | ENSP00000432073.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PID2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000436029.1 | NR1H3-016 | 911 | 212aa | ENSP00000403696.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449369.1 | NR1H3-013 | 825 | 205aa | ENSP00000415591.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JCS0 C9JEC2 C9JJ16 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000436778.1 | NR1H3-007 | 802 | 202aa | ENSP00000403798.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JEC2 C9JJ16 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000444396.1 | NR1H3-010 | 784 | 193aa | ENSP00000391005.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JEC2 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000531660.1 | NR1H3-037 | 667 | 167aa | ENSP00000434650.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPA1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000412937.1 | NR1H3-012 | 574 | 134aa | ENSP00000412636.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000457932.1 | NR1H3-011 | 552 | 77aa | ENSP00000413095.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEC2 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000437276.1 | NR1H3-017 | 440 | 68aa | ENSP00000396132.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEC2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000420369.1 | NR1H3-019 | 780 | 114aa | ENSP00000406692.1 | Nonsense mediated decay | F8WC63 | - | - | |
| ENST00000419652.1 | NR1H3-014 | 555 | 54aa | ENSP00000407716.1 | Nonsense mediated decay | F8WEY6 | - | - | |
| ENST00000529540.1 | NR1H3-029 | 1673 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000527464.1 | NR1H3-028 | 1183 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000461778.1 | NR1H3-015 | 726 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000525441.1 | NR1H3-039 | 610 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000476086.2 | NR1H3-038 | 588 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000495866.1 | NR1H3-026 | 569 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000532630.1 | NR1H3-036 | 549 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000473222.1 | NR1H3-022 | 549 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000530310.1 | NR1H3-035 | 542 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481020.1 | NR1H3-005 | 1704 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000487913.1 | NR1H3-008 | 852 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000462051.1 | NR1H3-024 | 706 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483882.1 | NR1H3-021 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000498548.1 | NR1H3-018 | 559 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486991.1 | NR1H3-009 | 539 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494018.1 | NR1H3-025 | 510 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
