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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RBM17 ENSG00000134453

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Description

RNA binding motif protein 17 [Source:HGNC Symbol;Acc:16944]

Gene Synonyms

MGC14439, SPF45

Location

Chromosome 10: 6,130,950-6,159,420 forward strand.

GRCh37:CM000672.1

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000446108.1	RBM17-201	3751	401aa	ENSP00000388638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7077	Q5W009 Q5W011 Q96I25	NM_001145547.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000379888.4	RBM17-003	2755	401aa	ENSP00000369218.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7077	Q5W009 Q5W011 Q96I25	NM_032905.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000437845.2	RBM17-005	833	240aa	ENSP00000395448.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5W012	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432931.1	RBM17-007	805	221aa	ENSP00000408214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5W010	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418631.1	RBM17-006	792	212aa	ENSP00000402303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5W011	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447032.1	RBM17-009	676	225aa	ENSP00000406024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000476706.1	RBM17-011	927	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481147.1	RBM17-010	611	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496762.1	RBM17-004	1585	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465906.1	RBM17-002	914	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467080.1	RBM17-001	837	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467214.1	RBM17-008	389	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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