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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PTGDS ENSG00000107317

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Description

prostaglandin D2 synthase 21kDa (brain) [Source:HGNC Symbol;Acc:9592]

Gene Synonyms

L-PGDS, LPGDS, PDS, PGD2, PGDS, PGDS2

Location

Chromosome 9: 139,871,956-139,879,887 forward strand.

GRCh37:CM000671.1

About this gene

This gene has 11 transcripts (splice variants), 78 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371625.3	PTGDS-001	807	190aa	ENSP00000360687.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7019	P41222	NM_000954.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000371623.3	PTGDS-004	921	160aa	ENSP00000360685.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SQ12	-	-
ENST00000224167.2	PTGDS-201	913	224aa	ENSP00000224167.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W7I2 Q5SQ11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000446677.1	PTGDS-005	754	213aa	ENSP00000397468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000457950.1	PTGDS-003	661	195aa	ENSP00000392633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SQ11	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444903.1	PTGDS-008	369	62aa	ENSP00000392692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000471521.1	PTGDS-002	989	190aa	ENSP00000435033.1	Nonsense mediated decay	CCDS7019	P41222	-	-
ENST00000460340.1	PTGDS-006	616	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462514.1	PTGDS-007	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492068.1	PTGDS-010	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467871.1	PTGDS-009	183	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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