Description
prostaglandin D2 synthase 21kDa (brain) [Source:HGNC Symbol;Acc:9592]
Gene Synonyms
L-PGDS, LPGDS, PDS, PGD2, PGDS, PGDS2
Location
Chromosome 9: 139,871,956-139,879,887 forward strand.
GRCh37:CM000671.1
About this gene
This gene has 11 transcripts (splice variants) and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000371625.3 | PTGDS-001 | 807 | 190aa | ENSP00000360687.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7019 | P41222 | NM_000954.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000371623.3 | PTGDS-004 | 921 | 160aa | ENSP00000360685.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5SQ12 | - | - | |
| ENST00000224167.2 | PTGDS-201 | 913 | 224aa | ENSP00000224167.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W7I2 Q5SQ11 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000446677.1 | PTGDS-005 | 754 | 213aa | ENSP00000397468.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000457950.1 | PTGDS-003 | 661 | 195aa | ENSP00000392633.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5SQ11 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000444903.1 | PTGDS-008 | 369 | 62aa | ENSP00000392692.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000471521.1 | PTGDS-002 | 989 | 190aa | ENSP00000435033.1 | Nonsense mediated decay | CCDS7019 | P41222 | - | - |
| ENST00000460340.1 | PTGDS-006 | 616 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000462514.1 | PTGDS-007 | 593 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000492068.1 | PTGDS-010 | 553 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000467871.1 | PTGDS-009 | 183 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
