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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COLGALT2 ENSG00000198756

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Description

collagen beta(1-O)galactosyltransferase 2 [Source:HGNC Symbol;Acc:16790]

Gene Synonyms

C1orf17, GLT25D2, KIAA0584

Location

Chromosome 1: 183,898,796-184,006,863 reverse strand.

GRCh37:CM000663.1

About this gene

This gene has 5 transcripts (splice variants) and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361927.4	COLGALT2-001	5177	626aa	ENSP00000354960.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1360	B3KT92 Q5SXQ5 Q8IYK4	NM_015101.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367521.1	COLGALT2-003	4723	234aa	ENSP00000356491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SXQ5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000546159.1	COLGALT2-201	2352	554aa	ENSP00000439112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3T5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367520.3	COLGALT2-002	2325	363aa	ENSP00000356490.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SXQ3 Q5SXQ5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000486375.1	COLGALT2-004	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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