Description
adhesion molecule, interacts with CXADR antigen 1 [Source:HGNC Symbol;Acc:19084]
Gene Synonyms
AMICA, CREA7-1, CREA7-4, Gm638, JAML
Location
Chromosome 11: 118,064,455-118,095,809 reverse strand.
GRCh37:CM000673.1
About this gene
This gene has 12 transcripts (splice variants).
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000356289.5 | AMICA1-001 | 1944 | 394aa | ENSP00000348635.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41723 | E9PJJ4 E9PNS8 Q496M1 Q86YT9 | NM_001098526.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000292067.7 | AMICA1-003 | 1959 | 384aa | ENSP00000292067.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8391 | E9PNS8 Q496M1 Q86YT9 | NM_153206.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000533261.1 | AMICA1-004 | 1508 | 383aa | ENSP00000436117.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PJJ4 E9PNS8 E9PR26 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000526620.1 | AMICA1-002 | 1383 | 355aa | ENSP00000431218.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS66240 | E9PNS8 Q496M1 | NM_001286571.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000524477.1 | AMICA1-011 | 591 | 120aa | ENSP00000432769.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PNS8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000525565.1 | AMICA1-009 | 574 | 155aa | ENSP00000431791.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PJJ4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000526595.1 | AMICA1-007 | 1935 | 305aa | ENSP00000431614.1 | Nonsense mediated decay | E9PKK2 E9PNS8 | - | - | |
| ENST00000527877.1 | AMICA1-010 | 547 | 66aa | ENSP00000435145.1 | Nonsense mediated decay | E9PLF9 | - | - | |
| ENST00000534294.1 | AMICA1-005 | 5610 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531530.1 | AMICA1-013 | 2624 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000529164.1 | AMICA1-006 | 1485 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000531536.1 | AMICA1-012 | 623 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
