Description
5-hydroxytryptamine (serotonin) receptor 3A, ionotropic [Source:HGNC Symbol;Acc:5297]
Gene Synonyms
5-HT-3, 5-HT3A, 5-HT3R, 5HT3R, HTR3
Location
Chromosome 11: 113,845,603-113,861,035 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 8 transcripts (splice variants) and 9 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000355556.2 | HTR3A-201 | 2331 | 516aa | ENSP00000347754.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8366 | B3VRG0 B3VRG5 B3VRH0 B3VRH5 B3VRI0 B3VRI5 B3VRJ5 B3VRK0 P46098 | NM_213621.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000504030.2 | HTR3A-001 | 2432 | 478aa | ENSP00000424189.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3VRG0 B3VRG5 B3VRH0 B3VRH5 B3VRI0 B3VRI5 B3VRJ5 B3VRK0 P46098 Q9UEP2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000375498.2 | HTR3A-202 | 2235 | 484aa | ENSP00000364648.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8365 | B3VRG0 B3VRG5 B3VRH0 B3VRH5 B3VRI0 B3VRI5 B3VRJ5 B3VRK0 P46098 Q9UEP2 | NM_000869.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000506841.2 | HTR3A-002 | 2221 | 510aa | ENSP00000424776.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3VRG0 B3VRG5 B3VRH0 B3VRH5 B3VRI0 B3VRI5 B3VRJ5 B3VRK0 P46098 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000299961.5 | HTR3A-003 | 1994 | 463aa | ENSP00000299961.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53710 | B3VRG0 B3VRG5 B3VRH0 B3VRH5 B3VRI0 B3VRI5 B3VRJ5 P46098 Q9UEP2 | NM_001161772.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000535865.1 | HTR3A-203 | 1385 | 222aa | ENSP00000437776.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3VRG0 B3VRG5 Q9UEP2 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000510849.1 | HTR3A-004 | 1385 | 238aa | ENSP00000423653.1 | Nonsense mediated decay | B3VRI0 B3VRI5 B3VRJ5 B3VRK0 | - | - | |
| ENST00000502622.1 | HTR3A-005 | 906 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
