Description
topoisomerase (DNA) III alpha [Source:HGNC Symbol;Acc:11992]
Gene Synonyms
TOP3
Location
Chromosome 17: 18,174,742-18,218,321 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 21 transcripts (splice variants), 1 paralogue and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000321105.5 | TOP3A-001 | 4056 | 1001aa | ENSP00000321636.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11194 | A8K398 B4DSJ0 Q13472 | NM_004618.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000542570.1 | TOP3A-202 | 3156 | 906aa | ENSP00000442336.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8K398 B4DK80 B4DSJ0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000580095.1 | TOP3A-020 | 2929 | 976aa | ENSP00000462790.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8K398 B4DSJ0 Q13472 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000540524.1 | TOP3A-201 | 1951 | 531aa | ENSP00000446425.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A8K398 B4DSJ0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000489131.1 | TOP3A-008 | 582 | 25aa | ENSP00000465864.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000584582.1 | TOP3A-010 | 3661 | 69aa | ENSP00000462136.1 | Nonsense mediated decay | J3KRR9 | - | - | |
| ENST00000582981.1 | TOP3A-009 | 3239 | 89aa | ENSP00000462378.1 | Nonsense mediated decay | J3KS96 | - | - | |
| ENST00000461127.1 | TOP3A-004 | 823 | 139aa | ENSP00000464338.1 | Nonsense mediated decay | J3QR18 | - | - | |
| ENST00000581536.1 | TOP3A-012 | 766 | 163aa | ENSP00000466641.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000585031.1 | TOP3A-015 | 575 | 95aa | ENSP00000464493.1 | Nonsense mediated decay | J3QS25 | - | - | |
| ENST00000582122.1 | TOP3A-019 | 553 | 133aa | ENSP00000466099.1 | Nonsense mediated decay | K7ELI7 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000493648.1 | TOP3A-007 | 503 | 52aa | ENSP00000465014.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000582230.1 | TOP3A-017 | 588 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000584669.1 | TOP3A-011 | 580 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000584887.1 | TOP3A-016 | 545 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000469739.2 | TOP3A-003 | 3196 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000583804.2 | TOP3A-013 | 1465 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000472959.1 | TOP3A-005 | 913 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000583328.1 | TOP3A-018 | 727 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000477508.1 | TOP3A-006 | 600 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000580713.1 | TOP3A-014 | 474 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
