Description
Wolf-Hirschhorn syndrome candidate 1-like 1 [Source:HGNC Symbol;Acc:12767]
Gene Synonyms
FLJ20353, NSD3, pp14328
Location
Chromosome 8: 38,127,215-38,239,790 reverse strand.
GRCh37:CM000670.1
About this gene
This gene has 12 transcripts (splice variants), 12 paralogues and is associated with 60 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000317025.8 | WHSC1L1-001 | 10776 | 1437aa | ENSP00000313983.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43729 | E9PKA2 E9PQ95 Q9BZ95 | NM_023034.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000433384.2 | WHSC1L1-003 | 5273 | 1388aa | ENSP00000393284.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKA2 E9PQ95 Q9BZ95 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000527502.1 | WHSC1L1-005 | 4471 | 1426aa | ENSP00000434730.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7ZL11 E9PKA2 E9PQ95 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000316985.3 | WHSC1L1-002 | 3995 | 645aa | ENSP00000313410.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6105 | E9PKA2 E9PQ95 Q9BZ95 | NM_017778.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000528627.1 | WHSC1L1-011 | 1524 | 77aa | ENSP00000435073.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YE68 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000529223.1 | WHSC1L1-009 | 1032 | 282aa | ENSP00000435422.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKA2 E9PQ95 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000534155.1 | WHSC1L1-008 | 577 | 25aa | ENSP00000432544.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PQ95 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000534539.1 | WHSC1L1-010 | 301 | 15aa | ENSP00000431598.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000525081.1 | WHSC1L1-007 | 1581 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000528828.1 | WHSC1L1-004 | 1376 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000528304.1 | WHSC1L1-012 | 508 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000526050.1 | WHSC1L1-013 | 359 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
