Human (GRCh37.p13)
Description

Wolf-Hirschhorn syndrome candidate 1-like 1 [Source:HGNC Symbol;Acc:12767]

Gene Synonyms

FLJ20353, NSD3, pp14328

Location

Chromosome 8: 38,127,215-38,239,790 reverse strand.

GRCh37:CM000670.1

About this gene

This gene has 12 transcripts (splice variants), 12 paralogues and is associated with 60 phenotypes.

Show/hide columns (1 hidden)
  • Transcript ID
  • Name
  • bp
  • Protein
  • Translation ID
  • Biotype
  • CCDS
  • UniProt Match
  • RefSeq
  • Flags
Transcript IDNamebpProteinBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000317025.8WHSC1L1-001107761437aa
 
Protein coding
CCDS43729E9PKA2 E9PQ95 Q9BZ95
NM_023034.1Ensembl CanonicalGENCODE Basic
ENST00000433384.2WHSC1L1-00352731388aa
 
Protein coding
E9PKA2 E9PQ95 Q9BZ95
-GENCODE Basic
ENST00000527502.1WHSC1L1-00544711426aa
 
Protein coding
B7ZL11 E9PKA2 E9PQ95
-GENCODE Basic
ENST00000316985.3WHSC1L1-0023995645aa
 
Protein coding
CCDS6105E9PKA2 E9PQ95 Q9BZ95
NM_017778.2GENCODE Basic
ENST00000528627.1WHSC1L1-011152477aa
 
Protein coding
H0YE68 -CDS 5' incomplete
ENST00000529223.1WHSC1L1-0091032282aa
 
Protein coding
E9PKA2 E9PQ95 -CDS 3' incomplete
ENST00000534155.1WHSC1L1-00857725aa
 
Protein coding
E9PQ95 -CDS 3' incomplete
ENST00000534539.1WHSC1L1-01030115aa
 
Protein coding
--CDS 3' incomplete
ENST00000525081.1WHSC1L1-0071581No protein
 
Processed transcript
---
ENST00000528828.1WHSC1L1-0041376No protein
 
Retained intron
---
ENST00000528304.1WHSC1L1-012508No protein
 
Retained intron
---
ENST00000526050.1WHSC1L1-013359No protein
 
Retained intron
---
Name

WHSC1L1 (HGNC Symbol)

UniProtKB

This gene has proteins that correspond to the following UniProtKB identifiers: Q9BZ95

CCDS

This gene is a member of the Human CCDS set: CCDS43729.1, CCDS6105.1

Ensembl version

ENSG00000147548.12

Other assemblies

This gene maps to 38,269,697-38,382,272 in GRCh38 coordinates.

Gene type

Protein coding

Annotation method

Annotation for this gene includes both automatic annotation from Ensembl and Havana manual curation, see article.

Alternative genes

This gene corresponds to the following database identifiers:

Havana gene:
OTTHUMG00000165115 (version 6)

Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

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Contigs

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