Description
tenascin C [Source:HGNC Symbol;Acc:5318]
Gene Synonyms
150-225, DFNA56, GMEM, GP, HXB, JI, MGC167029, TN, TN-C
Location
Chromosome 9: 117,782,806-117,880,536 reverse strand.
GRCh37:CM000671.1
About this gene
This gene has 16 transcripts (splice variants), 8 paralogues and is associated with 67 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000350763.4 | TNC-001 | 7641 | 2201aa | ENSP00000265131.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6811 | F5H5D6 P24821 | NM_002160.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000341037.4 | TNC-011 | 6786 | 2019aa | ENSP00000339553.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D6 J3QSU6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000340094.3 | TNC-201 | 6506 | 1837aa | ENSP00000344400.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D6 P24821 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000423613.2 | TNC-009 | 6281 | 1928aa | ENSP00000411406.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PC84 F5H5D6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000535648.1 | TNC-204 | 6233 | 1746aa | ENSP00000438152.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D6 P24821 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000346706.3 | TNC-203 | 5960 | 1655aa | ENSP00000344555.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D6 P24821 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000345230.3 | TNC-202 | 5687 | 1564aa | ENSP00000345861.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D6 P24821 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000542877.1 | TNC-007 | 5517 | 1838aa | ENSP00000442242.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9YUB8 F5H5D6 F5H7V9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000537320.1 | TNC-012 | 4946 | 1564aa | ENSP00000443478.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D6 P24821 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000544972.1 | TNC-013 | 1844 | 615aa | ENSP00000445380.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000534839.1 | TNC-010 | 734 | 92aa | ENSP00000443469.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H5D6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000481475.1 | TNC-004 | 823 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000476680.1 | TNC-003 | 696 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000460345.1 | TNC-002 | 651 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000498724.1 | TNC-006 | 566 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000473855.1 | TNC-005 | 386 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
