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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRAP1 ENSG00000126602

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Description

TNF receptor-associated protein 1 [Source:HGNC Symbol;Acc:16264]

Gene Synonyms

HSP 75, HSP75, HSP90L, TRAP-1

Location

Chromosome 16: 3,701,640-3,767,598 reverse strand.

GRCh37:CM000678.1

About this gene

This gene has 17 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000246957.5	TRAP1-001	2296	704aa	ENSP00000246957.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10508	I3L0K7 I3L0P6 Q12931	NM_016292.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000575671.1	TRAP1-004	2309	495aa	ENSP00000458166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0K7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538171.1	TRAP1-003	2052	651aa	ENSP00000442070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61824	F5H897 I3L0K7 I3L0P6	NM_001272049.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000576335.1	TRAP1-018	645	215aa	ENSP00000459354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L239	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000571538.1	TRAP1-010	587	35aa	ENSP00000458244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0P6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000575707.1	TRAP1-016	785	59aa	ENSP00000459385.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000571804.1	TRAP1-008	781	37aa	ENSP00000461618.1	Nonsense mediated decay		I3L4L7	-	-
ENST00000574175.1	TRAP1-013	535	108aa	ENSP00000459585.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000570403.1	TRAP1-009	521	37aa	ENSP00000461354.1	Nonsense mediated decay		I3L4L7	-	-
ENST00000571011.1	TRAP1-007	480	86aa	ENSP00000460545.1	Nonsense mediated decay		I3L3L4	-	-
ENST00000573872.1	TRAP1-012	656	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000575854.1	TRAP1-011	595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000576788.1	TRAP1-014	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574941.1	TRAP1-006	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000576106.1	TRAP1-005	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574494.1	TRAP1-017	547	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570514.1	TRAP1-015	412	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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