Human (GRCh37.p13)
Description

TNF receptor-associated protein 1 [Source:HGNC Symbol;Acc:16264]

Gene Synonyms

HSP 75, HSP75, HSP90L, TRAP-1

Location
About this transcript

This transcript has 18 exons, is annotated with 19 domains and features, is associated with 37717 variant alleles and maps to 594 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000575671.1TRAP1-0042309495aaENSP00000458166.1
 
Protein coding
I3L0K7 -GENCODE basic
ENST00000246957.5TRAP1-0012296704aaENSP00000246957.5
 
Protein coding
CCDS10508I3L0K7 I3L0P6 Q12931
NM_016292.2GENCODE basic
ENST00000538171.1TRAP1-0032052651aaENSP00000442070.1
 
Protein coding
CCDS61824F5H897 I3L0K7 I3L0P6
NM_001272049.1GENCODE basic
ENST00000576335.1TRAP1-018645215aaENSP00000459354.1
 
Protein coding
I3L239 -CDS 5' and 3' incomplete
ENST00000571538.1TRAP1-01058735aaENSP00000458244.1
 
Protein coding
I3L0P6 -CDS 3' incomplete
ENST00000575707.1TRAP1-01678559aaENSP00000459385.1
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000571804.1TRAP1-00878137aaENSP00000461618.1
 
Nonsense mediated decay
I3L4L7 --
ENST00000574175.1TRAP1-013535108aaENSP00000459585.1
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000570403.1TRAP1-00952137aaENSP00000461354.1
 
Nonsense mediated decay
I3L4L7 --
ENST00000571011.1TRAP1-00748086aaENSP00000460545.1
 
Nonsense mediated decay
I3L3L4 --
ENST00000573872.1TRAP1-012656No protein-
 
Processed transcript
---
ENST00000575854.1TRAP1-011595No protein-
 
Processed transcript
---
ENST00000576788.1TRAP1-014568No protein-
 
Processed transcript
---
ENST00000574941.1TRAP1-006558No protein-
 
Processed transcript
---
ENST00000576106.1TRAP1-005555No protein-
 
Processed transcript
---
ENST00000574494.1TRAP1-017547No protein-
 
Retained intron
---
ENST00000570514.1TRAP1-015412No protein-
 
Retained intron
---
Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,296 bps, Translation length: 704 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12931

CCDS

This transcript is a member of the Human CCDS set: CCDS10508

Version

ENST00000246957.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs11541712, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HAPMAP-TSI, CSHL-HAPMAP:HAPMAP-CHB, CSHL-HAPMAP:HapMap-CEU, CSHL-HAPMAP:HAPMAP-LWK.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000251586 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.