Description
protein tyrosine phosphatase, non-receptor type 20A [Source:HGNC Symbol;Acc:23422]
Gene Synonyms
CT126, PTPN20B, bA142I17.1, bA42B19.1, hPTPN20
Location
Chromosome 10: 46,549,955-46,641,045 reverse strand.
GRCh37:CM000672.1
About this gene
This gene has 32 transcripts (splice variants) and 13 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000374218.2 | PTPN20A-201 | 2872 | 339aa | ENSP00000363335.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41507 | Q4JDL3 | NM_001042395.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000437863.1 | PTPN20A-205 | 2870 | 392aa | ENSP00000403444.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 | NM_001042389.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000395721.2 | PTPN20A-007 | 2779 | 339aa | ENSP00000379071.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41507 | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000374342.2 | PTPN20A-202 | 2539 | 278aa | ENSP00000363462.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 G8JLF9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000374346.3 | PTPN20A-002 | 2481 | 226aa | ENSP00000363466.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31191 | D6RC68 Q4JDL3 Q5T1G4 | NM_001042387.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395722.3 | PTPN20A-203 | 2323 | 206aa | ENSP00000379072.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000395725.3 | PTPN20A-204 | 2226 | 145aa | ENSP00000379075.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41508 | Q4JDL3 Q5T1G4 | NM_001042396.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000506080.1 | PTPN20A-009 | 1401 | 392aa | ENSP00000421921.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000374339.3 | PTPN20A-001 | 1388 | 420aa | ENSP00000363459.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31190 | D6RC68 Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000511769.1 | PTPN20A-006 | 1339 | 411aa | ENSP00000424283.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41506 | Q4JDL3 | NM_001042390.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000505814.1 | PTPN20A-005 | 1244 | 339aa | ENSP00000426355.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41507 | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000509599.1 | PTPN20A-012 | 945 | 226aa | ENSP00000425012.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31191 | D6RC68 Q4JDL3 Q5T1G4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000513156.1 | PTPN20A-003 | 913 | 269aa | ENSP00000425912.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31189 | Q4JDL3 | NM_001042391.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000502705.1 | PTPN20A-013 | 854 | 206aa | ENSP00000420995.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000513266.1 | PTPN20A-011 | 818 | 197aa | ENSP00000422839.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000395727.2 | PTPN20A-004 | 790 | 228aa | ENSP00000379077.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41505 | Q4JDL3 | NM_001042392.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000509774.1 | PTPN20A-014 | 788 | 217aa | ENSP00000425362.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53531 | Q4JDL3 Q5T1G4 | NM_001042393.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000508602.1 | PTPN20A-015 | 742 | 198aa | ENSP00000424491.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 Q5T1G4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000509900.1 | PTPN20A-008 | 693 | 145aa | ENSP00000423819.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41508 | Q4JDL3 Q5T1G4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000502254.1 | PTPN20A-010 | 599 | 145aa | ENSP00000421404.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 Q4JDK3 Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000417004.1 | PTPN20A-016 | 567 | 126aa | ENSP00000396009.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T1G4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000503851.1 | PTPN20A-018 | 545 | 136aa | ENSP00000427676.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53530 | Q4JDK3 Q4JDL3 | NM_001042394.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000506881.1 | PTPN20A-017 | 457 | 68aa | ENSP00000422384.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000508357.1 | PTPN20A-020 | 1213 | 62aa | ENSP00000426681.1 | Nonsense mediated decay | D6RF36 | - | - | |
| ENST00000510335.1 | PTPN20A-021 | 1153 | 104aa | ENSP00000421453.1 | Nonsense mediated decay | Q4JDL3 | - | - | |
| ENST00000374340.3 | PTPN20A-019 | 3125 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000246887.6 | PTPN20A-022 | 1995 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000509181.1 | PTPN20A-027 | 1929 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000513756.1 | PTPN20A-025 | 640 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508715.1 | PTPN20A-026 | 586 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000513159.1 | PTPN20A-024 | 450 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000466912.1 | PTPN20A-028 | 446 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
