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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RAB40C ENSG00000197562

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Description

RAB40C, member RAS oncogene family [Source:HGNC Symbol;Acc:18285]

Gene Synonyms

RARL, RASL8C

Location

Chromosome 16: 639,357-679,272 forward strand.

GRCh37:CM000678.1

About this gene

This gene has 12 transcripts (splice variants) and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000535977.1	RAB40C-201	2717	281aa	ENSP00000438492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10413	H3BME4 H3BMH4 H3BNV8 H3BTC6 Q5PXE8 Q96S21	NM_001172663.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000248139.3	RAB40C-001	2699	281aa	ENSP00000248139.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10413	H3BME4 H3BMH4 H3BNV8 H3BTC6 Q5PXE8 Q96S21	NM_021168.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539661.1	RAB40C-203	2609	281aa	ENSP00000445050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10413	H3BME4 H3BMH4 H3BNV8 H3BTC6 Q5PXE8 Q96S21	NM_001172664.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538492.1	RAB40C-202	2569	281aa	ENSP00000438382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10413	H3BME4 H3BMH4 H3BNV8 H3BTC6 Q5PXE8 Q96S21	NM_001172666.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564703.1	RAB40C-005	921	38aa	ENSP00000454383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMH4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566290.1	RAB40C-008	753	213aa	ENSP00000455029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BME4 H3BMH4 H3BNV8 H3BTC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563109.1	RAB40C-003	710	237aa	ENSP00000455225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMH4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000569575.1	RAB40C-007	692	156aa	ENSP00000454347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BME4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568586.1	RAB40C-009	648	188aa	ENSP00000457116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BME4 H3BMH4 H3BTC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565511.1	RAB40C-004	783	130aa	ENSP00000457845.1	Nonsense mediated decay		H3BUX0	-	-
ENST00000509637.2	RAB40C-006	565	49aa	ENSP00000455232.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561781.1	RAB40C-002	2439	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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