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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CTDSP2 ENSG00000175215

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Description

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:HGNC Symbol;Acc:17077]

Gene Synonyms

NIF2, OS4, PSR2, SCP2

Location

Chromosome 12: 58,213,710-58,240,522 reverse strand.

GRCh37:CM000674.1

About this gene

This gene has 8 transcripts (splice variants), 209 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398073.2	CTDSP2-001	4795	271aa	ENSP00000381148.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41801	F8W184 O14595	NM_005730.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000548823.1	CTDSP2-003	1368	98aa	ENSP00000447046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1I1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000547701.1	CTDSP2-004	988	119aa	ENSP00000446705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W184	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000549039.1	CTDSP2-009	797	125aa	ENSP00000448386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YI29	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000550144.1	CTDSP2-006	544	182aa	ENSP00000448299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000551594.1	CTDSP2-007	900	102aa	ENSP00000448951.1	Nonsense mediated decay		F8VYL0	-	-
ENST00000547169.1	CTDSP2-005	1340	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552294.1	CTDSP2-008	436	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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