Description
LIM domain binding 2 [Source:HGNC Symbol;Acc:6533]
Gene Synonyms
CLIM1, LDB1
Location
Chromosome 4: 16,503,164-16,900,432 reverse strand.
GRCh37:CM000666.1
About this gene
This gene has 17 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000502640.1 | LDB2-004 | 2626 | 313aa | ENSP00000423963.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z2D3 D6RAT1 E9PFI4 Q4W5E7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000304523.5 | LDB2-001 | 2548 | 373aa | ENSP00000306772.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3420 | D6RAT1 O43679 Q4W5E7 | NM_001290.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000441778.2 | LDB2-003 | 2476 | 331aa | ENSP00000392089.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47031 | D6RAT1 O43679 Q4W5E7 | NM_001130834.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000515064.1 | LDB2-007 | 2295 | 371aa | ENSP00000422552.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAT1 G5E9Y7 Q4W5E7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000507464.1 | LDB2-005 | 1485 | 294aa | ENSP00000425754.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000503178.2 | LDB2-201 | 1108 | 189aa | ENSP00000440940.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z2D3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000506732.1 | LDB2-010 | 567 | 164aa | ENSP00000421767.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAT1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000508918.1 | LDB2-006 | 1498 | 110aa | ENSP00000424770.1 | Nonsense mediated decay | E7EX95 Q4W5E7 | - | - | |
| ENST00000512345.1 | LDB2-014 | 923 | 106aa | ENSP00000424676.1 | Nonsense mediated decay | E9PGU0 Q4W5E7 | - | - | |
| ENST00000503829.1 | LDB2-018 | 583 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000504886.1 | LDB2-015 | 574 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000503153.1 | LDB2-017 | 573 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000510825.1 | LDB2-013 | 562 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000513457.1 | LDB2-011 | 530 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000504189.1 | LDB2-009 | 499 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000509803.1 | LDB2-008 | 2718 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000508804.1 | LDB2-012 | 515 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
