Description
transforming growth factor beta 1 induced transcript 1 [Source:HGNC Symbol;Acc:11767]
Gene Synonyms
ARA55, HIC-5, HIC5, Hic-5, TSC-5
Location
Chromosome 16: 31,482,906-31,489,281 forward strand.
GRCh37:CM000678.1
About this gene
This gene has 17 transcripts (splice variants), 187 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000394863.3 | TGFB1I1-001 | 1898 | 461aa | ENSP00000378332.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42156 | H3BS04 H3BSN4 O43294 | NM_001042454.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000394858.2 | TGFB1I1-002 | 1803 | 444aa | ENSP00000378327.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10713 | H3BS04 H3BSN4 O43294 | NM_015927.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000361773.3 | TGFB1I1-201 | 1773 | 444aa | ENSP00000355117.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10713 | H3BS04 H3BSN4 O43294 | NM_001164719.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000567607.1 | TGFB1I1-004 | 1770 | 444aa | ENSP00000457586.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10713 | H3BS04 H3BSN4 O43294 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000565360.1 | TGFB1I1-020 | 684 | 216aa | ENSP00000455709.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BQC4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000562566.1 | TGFB1I1-015 | 668 | 89aa | ENSP00000456482.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BS04 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000565454.1 | TGFB1I1-012 | 573 | 165aa | ENSP00000456783.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BS04 H3BSN4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000564804.1 | TGFB1I1-005 | 1616 | 114aa | ENSP00000454688.1 | Nonsense mediated decay | H3BN49 H3BS04 | - | - | |
| ENST00000567066.2 | TGFB1I1-006 | 1453 | 52aa | ENSP00000456341.2 | Nonsense mediated decay | H3BRP2 | - | - | |
| ENST00000563712.2 | TGFB1I1-007 | 1302 | 61aa | ENSP00000459283.1 | Nonsense mediated decay | I3L209 | - | - | |
| ENST00000564176.1 | TGFB1I1-003 | 4973 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000568142.2 | TGFB1I1-019 | 2458 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000569703.1 | TGFB1I1-021 | 1005 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000561785.1 | TGFB1I1-017 | 577 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000569254.1 | TGFB1I1-014 | 570 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000567524.1 | TGFB1I1-016 | 560 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000562165.1 | TGFB1I1-018 | 466 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
