Description
LIM domain 7 [Source:HGNC Symbol;Acc:6646]
Gene Synonyms
FBX20, FBXO20, KIAA0858, LOMP
Location
Chromosome 13: 76,194,570-76,434,004 forward strand.
GRCh37:CM000675.1
About this gene
This gene has 27 transcripts (splice variants), 325 orthologues and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000465261.2 | LMO7-002 | 5580 | 1385aa | ENSP00000433352.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53876 | E9PLH4 E9PRJ0 | NM_015842.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000357063.3 | LMO7-201 | 8128 | 1670aa | ENSP00000349571.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLH4 E9PRJ0 J3KP06 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000377534.3 | LMO7-202 | 8025 | 1614aa | ENSP00000366757.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PRJ0 F8WD26 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000341547.4 | LMO7-001 | 7233 | 1349aa | ENSP00000342112.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9454 | E9PK58 E9PLU6 Q8WWI1 | NM_005358.5 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000321797.8 | LMO7-005 | 5647 | 1398aa | ENSP00000317802.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PMT2 E9PRJ0 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000526202.1 | LMO7-012 | 4121 | 1275aa | ENSP00000431129.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PJ10 E9PMS6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000377499.5 | LMO7-004 | 3472 | 1045aa | ENSP00000366719.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PK58 E9PLU6 E9PMP7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000447038.1 | LMO7-003 | 3165 | 1055aa | ENSP00000388955.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PRE3 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000497947.2 | LMO7-006 | 995 | 121aa | ENSP00000431271.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PLU6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000524651.1 | LMO7-021 | 914 | 305aa | ENSP00000433591.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000525914.1 | LMO7-020 | 874 | 292aa | ENSP00000434083.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000525373.1 | LMO7-025 | 672 | 191aa | ENSP00000431896.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PJ10 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000526371.1 | LMO7-022 | 650 | 165aa | ENSP00000432269.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PRJ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000489941.2 | LMO7-024 | 597 | 165aa | ENSP00000431636.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PK58 E9PLU6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000534657.1 | LMO7-017 | 589 | 12aa | ENSP00000434943.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533809.2 | LMO7-015 | 578 | 99aa | ENSP00000475811.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U3KQE6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000526528.1 | LMO7-023 | 572 | 141aa | ENSP00000434201.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PRE3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000525107.2 | LMO7-016 | 536 | 179aa | ENSP00000435296.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000605961.1 | LMO7-026 | 2039 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000485987.1 | LMO7-008 | 1087 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000533305.1 | LMO7-014 | 720 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000465309.2 | LMO7-007 | 572 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000482116.1 | LMO7-009 | 935 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000533299.1 | LMO7-013 | 623 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000532785.1 | LMO7-018 | 599 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000532377.1 | LMO7-019 | 595 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000467686.1 | LMO7-010 | 591 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
