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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SDC1 ENSG00000115884

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Description

syndecan 1 [Source:HGNC Symbol;Acc:10658]

Gene Synonyms

CD138, SDC, SYND1, syndecan

Location

Chromosome 2: 20,400,558-20,425,194 reverse strand.

GRCh37:CM000664.1

About this gene

This gene has 6 transcripts (splice variants) and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381150.1	SDC1-201	3291	310aa	ENSP00000370542.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1697	P18827	NM_001006946.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000254351.4	SDC1-001	3147	310aa	ENSP00000254351.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1697	P18827	NM_002997.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403076.1	SDC1-002	1523	169aa	ENSP00000384613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHH3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429035.1	SDC1-005	646	215aa	ENSP00000400773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C1K4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000447124.1	SDC1-004	591	28aa	ENSP00000390201.1	Nonsense mediated decay		F8WCX9	-	-
ENST00000482879.1	SDC1-003	1100	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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