Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: RAB5B ENSG00000111540

.

Description

RAB5B, member RAS oncogene family [Source:HGNC Symbol;Acc:9784]

Location

Chromosome 12: 56,367,697-56,388,490 forward strand.

GRCh37:CM000674.1

About this gene

This gene has 10 transcripts (splice variants) and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360299.5	RAB5B-001	3362	215aa	ENSP00000353444.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8900	F8VUA5 F8VVZ0 P61020	NM_002868.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553116.1	RAB5B-004	3322	215aa	ENSP00000450168.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8900	F8VUA5 F8VVZ0 P61020	NM_001252036.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448789.2	RAB5B-003	1530	174aa	ENSP00000391319.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58244	F8VVZ0 P61020	NM_001252037.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548068.1	RAB5B-005	596	115aa	ENSP00000447895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VUA5 F8VVZ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551459.1	RAB5B-007	569	100aa	ENSP00000449554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VVZ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549915.1	RAB5B-006	494	79aa	ENSP00000449762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VWZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549505.1	RAB5B-002	3148	73aa	ENSP00000450285.1	Nonsense mediated decay		F8VPW9	-	-
ENST00000550283.1	RAB5B-010	665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546810.1	RAB5B-008	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549034.1	RAB5B-009	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

.