Description
GA binding protein transcription factor, beta subunit 1 [Source:HGNC Symbol;Acc:4074]
Gene Synonyms
BABPB2, E4TF1, E4TF1-47, E4TF1-53, E4TF1B, GABPB, GABPB2, NRF2B1, NRF2B2
Location
Chromosome 15: 50,569,389-50,647,605 reverse strand.
GRCh37:CM000677.1
About this gene
This gene has 11 transcripts (splice variants), 148 orthologues and 2 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000220429.8 | GABPB1-005 | 2726 | 395aa | ENSP00000220429.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32239 | F5H7I4 H0YNZ0 Q06547 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000380877.3 | GABPB1-001 | 3016 | 383aa | ENSP00000370259.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10135 | H0YNZ0 Q06547 | NM_016654.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000359031.4 | GABPB1-201 | 1633 | 348aa | ENSP00000351923.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10136 | H0YNZ0 Q06547 | NM_181427.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000543881.1 | GABPB1-006 | 1450 | 319aa | ENSP00000442500.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H7I4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000560825.1 | GABPB1-007 | 1412 | 347aa | ENSP00000453463.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNZ0 H9ZYI9 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000396464.3 | GABPB1-002 | 1401 | 348aa | ENSP00000379728.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10136 | H0YNZ0 Q06547 | NM_016655.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000429662.2 | GABPB1-004 | 1392 | 360aa | ENSP00000395771.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45258 | H0YNZ0 Q06547 | NM_002041.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000561010.1 | GABPB1-012 | 867 | 203aa | ENSP00000453806.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000558970.1 | GABPB1-008 | 730 | 89aa | ENSP00000454211.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNZ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000558335.1 | GABPB1-009 | 406 | 89aa | ENSP00000453578.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YNZ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000559100.1 | GABPB1-010 | 290 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
