Description
MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:6940]
Gene Synonyms
ARHGEF21, DBL
Location
Chromosome X: 138,663,929-138,790,386 reverse strand.
GRCh37:CM000685.1
About this gene
This gene has 11 transcripts (splice variants), 266 orthologues and 22 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000519895.1 | MCF2-008 | 3346 | 1001aa | ENSP00000430276.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55517 | P10911 | NM_001171876.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000520602.1 | MCF2-001 | 3945 | 985aa | ENSP00000427745.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS48175 | P10911 Q5JYJ5 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000370578.4 | MCF2-201 | 3913 | 1070aa | ENSP00000359610.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JYJ5 Q5JYJ7 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000414978.1 | MCF2-202 | 3813 | 985aa | ENSP00000397055.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS48175 | P10911 Q5JYJ5 | NM_001099855.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000370576.4 | MCF2-002 | 3688 | 925aa | ENSP00000359608.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14667 | P10911 Q5JYJ5 | NM_005369.4 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000536274.1 | MCF2-203 | 3461 | 821aa | ENSP00000438155.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55514 | P10911 | NM_001171878.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000338585.6 | MCF2-004 | 2826 | 941aa | ENSP00000342204.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55516 | P10911 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000370573.4 | MCF2-003 | 2583 | 860aa | ENSP00000359605.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55515 | P10911 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000437564.1 | MCF2-006 | 1988 | 429aa | ENSP00000403271.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000446225.1 | MCF2-005 | 1916 | 528aa | ENSP00000405848.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JYJ5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000483690.1 | MCF2-007 | 752 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
