Description
histone deacetylase 4 [Source:HGNC Symbol;Acc:14063]
Gene Synonyms
AHO3, BDMR, HA6116, HD4, HDAC-4, HDAC-A, HDACA, KIAA0288
Location
Chromosome 2: 239,969,864-240,323,348 reverse strand.
GRCh37:CM000664.1
About this gene
This gene has 18 transcripts (splice variants), 5 paralogues and is associated with 5 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000345617.3 | HDAC4-001 | 8976 | 1084aa | ENSP00000264606.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2529 | C9J0X4 F5GX36 F5H0B1 P56524 Q53SB4 Q53SM2 | NM_006037.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541256.1 | HDAC4-201 | 2775 | 737aa | ENSP00000443057.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J481 F5H5W4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000543185.1 | HDAC4-202 | 2707 | 668aa | ENSP00000440481.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GX36 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000430200.1 | HDAC4-013 | 578 | 175aa | ENSP00000410551.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000454542.1 | HDAC4-008 | 565 | 162aa | ENSP00000405226.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J481 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000446876.1 | HDAC4-007 | 554 | 123aa | ENSP00000392912.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J0X4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000445704.1 | HDAC4-009 | 445 | 148aa | ENSP00000391226.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000544989.1 | HDAC4-015 | 342 | 29aa | ENSP00000438111.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5H0B1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553145.1 | HDAC4-018 | 552 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000494800.1 | HDAC4-012 | 451 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000493582.1 | HDAC4-002 | 3188 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000463007.1 | HDAC4-004 | 3158 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000535493.1 | HDAC4-016 | 2743 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461113.1 | HDAC4-006 | 1019 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000496347.1 | HDAC4-005 | 995 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000495497.1 | HDAC4-010 | 849 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000487617.1 | HDAC4-014 | 819 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460235.1 | HDAC4-011 | 343 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
