Description
nuclear receptor subfamily 1, group H, member 3 [Source:HGNC Symbol;Acc:7966]
Gene Synonyms
LXR-a, LXRA, RLD-1
Location
Chromosome 11: 47,269,851-47,290,396 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 34 transcripts (splice variants) and 18 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000467728.1 | NR1H3-001 | 2731 | 447aa | ENSP00000420656.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7929 | C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 F1D8N1 Q13133 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000481889.2 | NR1H3-023 | 1704 | 466aa | ENSP00000433271.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 E9PLL4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000441012.2 | NR1H3-030 | 1637 | 447aa | ENSP00000387946.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7929 | C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 F1D8N1 Q13133 | NM_005693.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395397.3 | NR1H3-031 | 1501 | 402aa | ENSP00000378793.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44585 | C9J2C8 Q13133 | NM_001130102.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000405853.3 | NR1H3-006 | 1480 | 387aa | ENSP00000384745.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44584 | B5MBY7 C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 E9PID2 Q13133 | NM_001130101.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000405576.1 | NR1H3-003 | 1352 | 342aa | ENSP00000385073.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5MBY7 C9J2C8 E9PID2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000407404.1 | NR1H3-002 | 1330 | 387aa | ENSP00000385801.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44584 | B5MBY7 C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 E9PID2 Q13133 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000527949.1 | NR1H3-032 | 1065 | 296aa | ENSP00000432073.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PID2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000436029.1 | NR1H3-016 | 911 | 212aa | ENSP00000403696.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JBS2 C9JCS0 C9JEC2 C9JJ16 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000449369.1 | NR1H3-013 | 825 | 205aa | ENSP00000415591.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JCS0 C9JEC2 C9JJ16 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000436778.1 | NR1H3-007 | 802 | 202aa | ENSP00000403798.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JEC2 C9JJ16 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000444396.1 | NR1H3-010 | 784 | 193aa | ENSP00000391005.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 C9J4R0 C9JEC2 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000531660.1 | NR1H3-037 | 667 | 167aa | ENSP00000434650.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PPA1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000412937.1 | NR1H3-012 | 574 | 134aa | ENSP00000412636.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J2C8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000457932.1 | NR1H3-011 | 552 | 77aa | ENSP00000413095.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEC2 C9JTS4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000437276.1 | NR1H3-017 | 440 | 68aa | ENSP00000396132.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEC2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000420369.1 | NR1H3-019 | 780 | 114aa | ENSP00000406692.1 | Nonsense mediated decay | F8WC63 | - | - | |
| ENST00000419652.1 | NR1H3-014 | 555 | 54aa | ENSP00000407716.1 | Nonsense mediated decay | F8WEY6 | - | - | |
| ENST00000529540.1 | NR1H3-029 | 1673 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000527464.1 | NR1H3-028 | 1183 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000461778.1 | NR1H3-015 | 726 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000525441.1 | NR1H3-039 | 610 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000476086.2 | NR1H3-038 | 588 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000495866.1 | NR1H3-026 | 569 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000532630.1 | NR1H3-036 | 549 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000473222.1 | NR1H3-022 | 549 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000530310.1 | NR1H3-035 | 542 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481020.1 | NR1H3-005 | 1704 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000487913.1 | NR1H3-008 | 852 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000462051.1 | NR1H3-024 | 706 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483882.1 | NR1H3-021 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000498548.1 | NR1H3-018 | 559 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486991.1 | NR1H3-009 | 539 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494018.1 | NR1H3-025 | 510 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
