Description
ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 [Source:HGNC Symbol;Acc:811]
Gene Synonyms
ATP2A, SERCA1
Location
Chromosome 16: 28,889,726-28,915,830 forward strand.
GRCh37:CM000678.1
About this gene
This gene has 9 transcripts (splice variants), 4 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000357084.3 | ATP2A1-001 | 3532 | 1001aa | ENSP00000349595.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10643 | H3BUU3 O14983 | NM_173201.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395503.4 | ATP2A1-002 | 3536 | 994aa | ENSP00000378879.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42139 | B3KS35 B3KY17 H3BUU3 O14983 | NM_004320.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000536376.1 | ATP2A1-003 | 3130 | 869aa | ENSP00000443101.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS66997 | B3KS35 B3KY17 H3BUU3 | NM_001286075.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000562185.1 | ATP2A1-008 | 576 | 26aa | ENSP00000457798.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BUU3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000563975.1 | ATP2A1-007 | 545 | 113aa | ENSP00000458035.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BVB2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000564112.1 | ATP2A1-010 | 195 | 24aa | ENSP00000457793.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000564732.1 | ATP2A1-009 | 831 | 128aa | ENSP00000457357.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000564470.1 | ATP2A1-005 | 467 | 41aa | ENSP00000457148.1 | Nonsense mediated decay | H3BTF1 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000565042.1 | ATP2A1-006 | 239 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
