Description
histone deacetylase 3 [Source:HGNC Symbol;Acc:4854]
Gene Synonyms
HD3, RPD3, RPD3-2
Location
Chromosome 5: 141,000,443-141,016,437 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 16 transcripts (splice variants) and 3 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000305264.3 | HDAC3-001 | 1959 | 428aa | ENSP00000302967.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS4264 | B5MGH4 O15379 Q9H368 | NM_003883.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000523088.1 | HDAC3-016 | 699 | 218aa | ENSP00000429099.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B5MGH4 E7ESJ6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000519474.1 | HDAC3-015 | 736 | 53aa | ENSP00000430782.1 | Nonsense mediated decay | B5MGH4 E7EW19 | - | - | |
| ENST00000469207.1 | HDAC3-013 | 829 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000459727.1 | HDAC3-012 | 524 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000469550.2 | HDAC3-014 | 1952 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492506.1 | HDAC3-002 | 830 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000495485.1 | HDAC3-003 | 797 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492407.1 | HDAC3-007 | 782 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000491581.1 | HDAC3-011 | 777 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486618.1 | HDAC3-009 | 711 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000467533.1 | HDAC3-005 | 663 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000490808.1 | HDAC3-006 | 605 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000471968.1 | HDAC3-004 | 529 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476739.1 | HDAC3-008 | 422 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000475549.1 | HDAC3-010 | 297 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
