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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FNTA ENSG00000168522

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Description

farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:3782]

Gene Synonyms

FPTA, PGGT1A, PTAR2

Location

Chromosome 8: 42,889,337-42,940,931 forward strand.

GRCh37:CM000670.1

About this gene

This gene has 15 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302279.3	FNTA-001	1840	379aa	ENSP00000303423.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6140	B3KVN2 D3DSY9 E9PPM9 P49354	NM_002027.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529687.1	FNTA-004	1950	228aa	ENSP00000473479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KVN2 E9PPM9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342116.4	FNTA-201	1445	312aa	ENSP00000343931.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KVN2 E9PPM9 P49354	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533336.1	FNTA-007	874	249aa	ENSP00000434430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPM9 E9PQP6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531266.1	FNTA-008	590	196aa	ENSP00000432411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPM9 H0YCW1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000525699.1	FNTA-009	516	60aa	ENSP00000436998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPM9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526755.1	FNTA-002	4676	67aa	ENSP00000437208.1	Nonsense mediated decay		E9PK84	-	-
ENST00000533383.1	FNTA-005	982	67aa	ENSP00000435455.1	Nonsense mediated decay		E9PK84	-	-
ENST00000533998.1	FNTA-006	581	117aa	ENSP00000432892.1	Nonsense mediated decay		E9PN85	-	-
ENST00000524546.1	FNTA-011	750	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527153.1	FNTA-010	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533559.1	FNTA-014	429	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525099.1	FNTA-003	7327	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528400.1	FNTA-012	601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533368.1	FNTA-013	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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