Description
SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:17028]
Gene Synonyms
Dot3, EAP30, VPS22
Location
Chromosome 17: 47,006,678-47,022,479 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 17 transcripts (splice variants).
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000502492.1 | SNF8-001 | 2319 | 258aa | ENSP00000421380.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11541 | D6RJ86 Q96H20 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000290330.3 | SNF8-002 | 951 | 257aa | ENSP00000290330.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RJ86 Q96H20 | NM_007241.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000510558.2 | SNF8-006 | 1051 | 167aa | ENSP00000421390.2 | Nonsense mediated decay | D6RFY6 D6RJ86 | - | - | |
ENST00000514929.1 | SNF8-004 | 775 | 141aa | ENSP00000427328.1 | Nonsense mediated decay | D6RJ86 | - | - | |
ENST00000507302.2 | SNF8-007 | 742 | 103aa | ENSP00000422701.1 | Nonsense mediated decay | D6RBI1 | - | - | |
ENST00000576353.1 | SNF8-016 | 700 | 53aa | ENSP00000460001.1 | Nonsense mediated decay | I3L2X5 | - | - | |
ENST00000509989.1 | SNF8-011 | 677 | 16aa | ENSP00000467548.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000573795.1 | SNF8-017 | 583 | 36aa | ENSP00000460981.1 | Nonsense mediated decay | I3L457 | - | - | |
ENST00000509995.1 | SNF8-008 | 560 | 81aa | ENSP00000421956.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000514089.1 | SNF8-015 | 571 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000504000.1 | SNF8-003 | 1899 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000512243.1 | SNF8-009 | 863 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000515174.1 | SNF8-010 | 823 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000515572.1 | SNF8-012 | 687 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000506104.1 | SNF8-014 | 455 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000510195.1 | SNF8-005 | 445 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000511214.1 | SNF8-013 | 429 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |