Description
transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:HGNC Symbol;Acc:11641]
Gene Synonyms
TCF-4, TCF4
Location
Chromosome 10: 114,710,009-114,927,437 forward strand.
GRCh37:CM000672.1
About this gene
This gene has 22 transcripts (splice variants), 3 paralogues and is associated with 69 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000543371.1 | TCF7L2-208 | 4022 | 602aa | ENSP00000444972.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53577 | C6ZRJ8 E2GH26 Q9NQB0 | NM_001198531.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000355995.4 | TCF7L2-203 | 4073 | 619aa | ENSP00000348274.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E2GH25 Q9NQB0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000545257.1 | TCF7L2-209 | 4073 | 619aa | ENSP00000440547.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9NQB0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000536810.1 | TCF7L2-205 | 4022 | 602aa | ENSP00000446238.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JRY5 Q9NQB0 | NM_001146285.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000355717.4 | TCF7L2-202 | 4021 | 489aa | ENSP00000347949.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53578 | B3KQC6 Q5JRY4 Q9NQB0 | NM_001198530.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000538897.1 | TCF7L2-206 | 4000 | 482aa | ENSP00000446172.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B9X074 Q9NQB0 | NM_001198529.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000369397.4 | TCF7L2-003 | 3802 | 596aa | ENSP00000358404.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS7576 | C6ZRK4 C6ZRK5 Q6FHW4 Q9NQB0 | NM_030756.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000534894.1 | TCF7L2-204 | 1992 | 494aa | ENSP00000443626.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9NQB0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000542695.1 | TCF7L2-207 | 1920 | 335aa | ENSP00000443883.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E2GH20 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000352065.5 | TCF7L2-201 | 1547 | 459aa | ENSP00000344823.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55729 | B4E165 C6ZRJ9 Q9NQB0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000369386.1 | TCF7L2-006 | 1274 | 120aa | ENSP00000358393.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YEE5 Q5JRY3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000349937.2 | TCF7L2-004 | 1174 | 288aa | ENSP00000298692.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5VVR8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000369395.1 | TCF7L2-001 | 1041 | 317aa | ENSP00000358402.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5VVR7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000369389.1 | TCF7L2-007 | 738 | 176aa | ENSP00000358396.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KQC6 Q5JRY4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000346198.4 | TCF7L2-002 | 667 | 222aa | ENSP00000345640.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5VVR5 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000277945.7 | TCF7L2-010 | 620 | 206aa | ENSP00000277945.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5JRY5 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000470254.1 | TCF7L2-013 | 768 | 108aa | ENSP00000435694.1 | Nonsense mediated decay | H0YEE5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000466338.1 | TCF7L2-011 | 1026 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000476887.1 | TCF7L2-009 | 836 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000494353.1 | TCF7L2-012 | 500 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000471569.1 | TCF7L2-005 | 330 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000480888.1 | TCF7L2-008 | 182 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
