Description
rhomboid 5 homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:20788]
Gene Synonyms
FLJ22341, IRHOM2, RHBDL5, RHBDL6, TOC
Location
Chromosome 17: 74,466,973-74,497,872 reverse strand.
GRCh37:CM000679.1
About this gene
This gene has 19 transcripts (splice variants), 1 paralogue and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000313080.4 | RHBDF2-001 | 3582 | 856aa | ENSP00000322775.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32743 | K7EJ10 K7ELA9 K7EPV3 K7EQT5 Q6PJF5 | NM_024599.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000591885.1 | RHBDF2-002 | 3599 | 827aa | ENSP00000466867.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32744 | K7EIY3 K7EJ10 K7EKA3 K7EKI1 K7ELA9 K7EQ53 K7EQT5 Q6PJF5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000389760.4 | RHBDF2-201 | 3516 | 827aa | ENSP00000374410.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32744 | K7EIY3 K7EJ10 K7EKA3 K7EKI1 K7ELA9 K7EQ53 K7EQT5 Q6PJF5 | NM_001005498.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000592123.1 | RHBDF2-012 | 935 | 185aa | ENSP00000467549.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJ10 K7ELA9 K7EPV3 K7EQT5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000590288.1 | RHBDF2-008 | 734 | 26aa | ENSP00000465990.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ELA9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000589526.1 | RHBDF2-013 | 629 | 89aa | ENSP00000467677.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EIY3 K7EJ10 K7EKA3 K7ELA9 K7EQ53 K7EQT5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591697.1 | RHBDF2-009 | 613 | 74aa | ENSP00000464942.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EIY3 K7EJ10 K7EKA3 K7ELA9 K7EQT5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591879.1 | RHBDF2-017 | 589 | 73aa | ENSP00000465531.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJ10 K7EKA3 K7ELA9 K7EQT5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591860.1 | RHBDF2-020 | 582 | 86aa | ENSP00000467468.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EPN8 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000590322.1 | RHBDF2-015 | 574 | 28aa | ENSP00000464975.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJ10 K7ELA9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000585701.1 | RHBDF2-016 | 572 | 47aa | ENSP00000466029.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJ10 K7ELA9 K7EQT5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000585989.1 | RHBDF2-010 | 568 | 112aa | ENSP00000465632.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EIY3 K7EJ10 K7EKA3 K7EKI1 K7ELA9 K7EQ53 K7EQT5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591192.1 | RHBDF2-014 | 554 | 47aa | ENSP00000467971.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJ10 K7ELA9 K7EQT5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591255.1 | RHBDF2-011 | 545 | 13aa | ENSP00000465124.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592378.1 | RHBDF2-019 | 533 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000590168.1 | RHBDF2-006 | 2665 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000587640.1 | RHBDF2-005 | 2097 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000589582.1 | RHBDF2-004 | 1726 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000593103.1 | RHBDF2-018 | 562 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
