Description
protein tyrosine phosphatase, non-receptor type 12 [Source:HGNC Symbol;Acc:9645]
Gene Synonyms
PTP-PEST, PTPG1
Location
Chromosome 7: 77,166,592-77,269,388 forward strand.
GRCh37:CM000669.1
About this gene
This gene has 16 transcripts (splice variants) and 13 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000248594.6 | PTPN12-001 | 3406 | 780aa | ENSP00000248594.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5592 | A4D1C5 C9J1X8 C9JJC1 E9PBR5 F8WB51 Q05209 | NM_002835.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000435495.2 | PTPN12-003 | 2526 | 650aa | ENSP00000397991.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47620 | Q05209 | NM_001131009.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000415482.2 | PTPN12-002 | 2316 | 661aa | ENSP00000392429.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47619 | C9J1X8 C9JJC1 E9PBR5 F8WB51 | NM_001131008.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000407343.3 | PTPN12-019 | 704 | 234aa | ENSP00000385079.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BM04 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000522115.2 | PTPN12-016 | 642 | 214aa | ENSP00000430726.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000418110.1 | PTPN12-009 | 564 | 86aa | ENSP00000392526.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1X8 C9JJC1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000433369.2 | PTPN12-006 | 552 | 45aa | ENSP00000404050.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJC1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000440186.1 | PTPN12-004 | 159 | 17aa | ENSP00000413449.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000447995.2 | PTPN12-012 | 572 | 113aa | ENSP00000397364.1 | Nonsense mediated decay | C9J1X8 C9JJC1 F8WB51 | - | - | |
| ENST00000523952.1 | PTPN12-015 | 500 | 43aa | ENSP00000428735.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000520947.1 | PTPN12-017 | 664 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000481154.1 | PTPN12-011 | 630 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460731.1 | PTPN12-010 | 582 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000464313.1 | PTPN12-013 | 551 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494248.1 | PTPN12-014 | 470 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000519553.1 | PTPN12-018 | 395 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
