Description
polymerase (RNA) I polypeptide B, 128kDa [Source:HGNC Symbol;Acc:20454]
Gene Synonyms
FLJ10816, FLJ21921, RPA135, RPA2, Rpo1-2
Location
Chromosome 2: 113,299,492-113,334,635 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 17 transcripts (splice variants), 2 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000263331.5 | POLR1B-001 | 4558 | 1135aa | ENSP00000263331.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2097 | B7Z1W6 C9JJG2 C9JS83 F5H643 Q6DKI9 Q9BSR4 Q9H9Y6 | NM_019014.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000409894.3 | POLR1B-003 | 4457 | 952aa | ENSP00000387143.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS62989 | C9JJG2 C9JS83 F8W898 | NM_001282774.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000541869.1 | POLR1B-202 | 4059 | 1173aa | ENSP00000444136.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS62988 | B7Z1W6 C9JJG2 C9JS83 F5GZX4 F5H643 Q6DKI9 Q9BSR4 | NM_001282772.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000417433.2 | POLR1B-005 | 3836 | 1079aa | ENSP00000405358.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46395 | B7Z1W6 F5H643 Q6DKI9 Q9BSR4 Q9H9Y6 | NM_001137604.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000537335.1 | POLR1B-201 | 3143 | 924aa | ENSP00000437914.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS62990 | F5H643 Q6DKI9 Q9BSR4 | NM_001282776.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000458012.2 | POLR1B-015 | 923 | 307aa | ENSP00000394408.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C0D9 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000430769.1 | POLR1B-006 | 572 | 114aa | ENSP00000415754.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJG2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000438748.1 | POLR1B-007 | 555 | 128aa | ENSP00000388577.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JJG2 C9JS83 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000333990.6 | POLR1B-002 | 4376 | 73aa | ENSP00000334589.6 | Nonsense mediated decay | F8WAK7 | - | - | |
| ENST00000448770.1 | POLR1B-004 | 2494 | 105aa | ENSP00000390274.1 | Nonsense mediated decay | F8WCS3 | - | - | |
| ENST00000430293.1 | POLR1B-008 | 595 | 65aa | ENSP00000403094.1 | Nonsense mediated decay | F8WDS4 | - | - | |
| ENST00000424062.1 | POLR1B-009 | 558 | 92aa | ENSP00000390973.1 | Nonsense mediated decay | F8WBB9 | - | - | |
| ENST00000498054.1 | POLR1B-013 | 636 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496238.1 | POLR1B-010 | 587 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000475318.1 | POLR1B-012 | 680 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000468475.1 | POLR1B-011 | 569 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000484574.1 | POLR1B-014 | 551 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
