Description
histone deacetylase 6 [Source:HGNC Symbol;Acc:14064]
Gene Synonyms
CPBHM, FLJ16239, HD6, JM21, KIAA0901
Location
Chromosome X: 48,659,784-48,683,392 forward strand.
GRCh37:CM000685.1
View alleles of this gene on alternative sequences
About this gene
This gene has 38 transcripts (splice variants), 1 gene allele, 5 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000334136.5 | HDAC6-001 | 4190 | 1215aa | ENSP00000334061.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14306 | A6NDI8 C9J172 C9JEF4 E7EP63 E7ER52 E9PEH1 Q9UBN7 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000376619.2 | HDAC6-017 | 4179 | 1215aa | ENSP00000365804.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS14306 | A6NDI8 C9J172 C9JEF4 E7EP63 E7ER52 E9PEH1 Q9UBN7 | NM_006044.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000444343.2 | HDAC6-202 | 3887 | 1229aa | ENSP00000398566.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NDI8 B4DZH6 C9J172 C9JEF4 E7EP63 E7ER52 E9PEH1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000413163.2 | HDAC6-201 | 1130 | 296aa | ENSP00000398801.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EUZ1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000376643.2 | HDAC6-007 | 907 | 210aa | ENSP00000365831.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NDI8 C9J172 C9JEF4 E7EP63 E7ER52 E9PEH1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000426196.1 | HDAC6-015 | 882 | 269aa | ENSP00000402189.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NDI8 C9J172 C9JEF4 E7EP63 E7EPS2 E7ER52 E9PEH1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000376610.2 | HDAC6-023 | 736 | 210aa | ENSP00000365795.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NDI8 C9J172 C9JEF4 E7EP63 E7ER52 E9PEH1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000440653.1 | HDAC6-031 | 658 | 171aa | ENSP00000394377.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J172 C9JEF4 E7EP63 E7ER52 E9PEH1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430858.1 | HDAC6-016 | 618 | 84aa | ENSP00000397697.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000438518.1 | HDAC6-021 | 610 | 51aa | ENSP00000403370.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JEF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000441703.1 | HDAC6-028 | 599 | 161aa | ENSP00000393916.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J172 C9JEF4 E9PEH1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000423941.1 | HDAC6-020 | 583 | 142aa | ENSP00000392815.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J172 C9JEF4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000443563.1 | HDAC6-030 | 568 | 167aa | ENSP00000402751.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J172 C9JEF4 E7EP63 E9PEH1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000469223.1 | HDAC6-022 | 796 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000477561.1 | HDAC6-025 | 764 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000486665.1 | HDAC6-036 | 598 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000483656.1 | HDAC6-024 | 585 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000498808.1 | HDAC6-040 | 566 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000480525.1 | HDAC6-012 | 412 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000477528.1 | HDAC6-002 | 4832 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000486227.1 | HDAC6-018 | 4718 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000488543.1 | HDAC6-019 | 2484 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000462730.1 | HDAC6-003 | 1999 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000465269.1 | HDAC6-004 | 1139 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476625.1 | HDAC6-005 | 967 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000470942.1 | HDAC6-037 | 668 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000485102.1 | HDAC6-033 | 667 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000478095.1 | HDAC6-026 | 620 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000481929.1 | HDAC6-027 | 591 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000489352.1 | HDAC6-029 | 585 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000468949.1 | HDAC6-032 | 572 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000495515.1 | HDAC6-013 | 569 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000465457.1 | HDAC6-035 | 563 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483506.1 | HDAC6-038 | 545 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000489053.1 | HDAC6-039 | 539 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000488905.1 | HDAC6-034 | 492 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000493923.1 | HDAC6-009 | 404 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461608.1 | HDAC6-010 | 397 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
