Description
protein tyrosine phosphatase, non-receptor type 18 (brain-derived) [Source:HGNC Symbol;Acc:9649]
Gene Synonyms
BDP1, PTP-HSCF
Location
Chromosome 2: 131,113,580-131,132,982 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 16 transcripts (splice variants) and 13 paralogues.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000175756.5 | PTPN18-001 | 3669 | 460aa | ENSP00000175756.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2161 | B4DNE5 Q99952 | NM_014369.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000347849.3 | PTPN18-002 | 2472 | 353aa | ENSP00000310092.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46410 | B4DNE5 Q7Z637 Q99952 | NM_001142370.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000409022.2 | PTPN18-003 | 993 | 269aa | ENSP00000387031.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DNE5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000428843.1 | PTPN18-006 | 785 | 48aa | ENSP00000411750.1 | Nonsense mediated decay | F8WBM9 | - | - | |
ENST00000420717.1 | PTPN18-013 | 599 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000462321.1 | PTPN18-004 | 1717 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000481492.1 | PTPN18-012 | 1394 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000490812.1 | PTPN18-010 | 833 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000462996.1 | PTPN18-011 | 759 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000483617.1 | PTPN18-007 | 595 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000495400.1 | PTPN18-009 | 552 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000479295.1 | PTPN18-014 | 513 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000489215.1 | PTPN18-005 | 460 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000490137.1 | PTPN18-016 | 411 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000460992.1 | PTPN18-008 | 398 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000464576.1 | PTPN18-015 | 393 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |