Description
calpain 1, (mu/I) large subunit [Source:HGNC Symbol;Acc:1476]
Gene Synonyms
CANP, CANP1, CANPL1, muCANP, muCL
Location
Chromosome 11: 64,948,037-64,979,477 forward strand.
GRCh37:CM000673.1
About this gene
This gene has 28 transcripts (splice variants), 13 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000527323.1 | CAPN1-004 | 3086 | 714aa | ENSP00000431984.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44644 | E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6 P07384 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000533820.1 | CAPN1-001 | 3083 | 714aa | ENSP00000435272.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44644 | E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6 P07384 | NM_001198868.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000279247.6 | CAPN1-003 | 3007 | 714aa | ENSP00000279247.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44644 | E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6 P07384 | NM_005186.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000524773.1 | CAPN1-002 | 2960 | 714aa | ENSP00000434176.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44644 | E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6 P07384 | NM_001198869.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000533129.1 | CAPN1-028 | 2792 | 714aa | ENSP00000431686.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44644 | E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6 P07384 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000526468.1 | CAPN1-015 | 690 | 191aa | ENSP00000433366.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PL37 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529133.1 | CAPN1-027 | 593 | 191aa | ENSP00000432512.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PSA6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000527739.1 | CAPN1-009 | 582 | 161aa | ENSP00000433823.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000534373.1 | CAPN1-010 | 581 | 135aa | ENSP00000431793.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PIA9 E9PJJ3 E9PLX0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000533909.1 | CAPN1-029 | 573 | 148aa | ENSP00000435198.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PIA9 E9PJJ3 E9PLC9 E9PLX0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000528396.1 | CAPN1-026 | 571 | 163aa | ENSP00000435847.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PSA6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000532285.1 | CAPN1-011 | 568 | 63aa | ENSP00000436693.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PIA9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000527699.1 | CAPN1-013 | 564 | 152aa | ENSP00000431172.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PIA9 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000526966.1 | CAPN1-017 | 550 | 161aa | ENSP00000431528.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000531068.1 | CAPN1-012 | 496 | 122aa | ENSP00000435092.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PIA9 E9PLX0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000526954.1 | CAPN1-021 | 754 | 201aa | ENSP00000436002.1 | Nonsense mediated decay | E9PIA9 E9PJA6 E9PJJ3 E9PLC9 E9PLX0 E9PMC6 E9PQB3 E9PRM1 E9PSA6 | - | - | |
| ENST00000527469.1 | CAPN1-020 | 584 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000530495.1 | CAPN1-025 | 572 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000527189.1 | CAPN1-019 | 558 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000528739.1 | CAPN1-032 | 341 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000528165.1 | CAPN1-007 | 2828 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000530567.1 | CAPN1-008 | 1415 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000527897.1 | CAPN1-006 | 879 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000533079.1 | CAPN1-022 | 878 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000525013.1 | CAPN1-023 | 643 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000533704.1 | CAPN1-024 | 643 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000530442.1 | CAPN1-014 | 577 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000527887.1 | CAPN1-016 | 348 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
