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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ALYREF ENSG00000183684

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Description

Aly/REF export factor [Source:HGNC Symbol;Acc:19071]

Gene Synonyms

ALY, ALY/REF, BEF, REF, THOC4

Location

Chromosome 17: 79,845,713-79,849,462 reverse strand.

GRCh37:CM000679.1

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000505490.2	ALYREF-001	1088	264aa	ENSP00000421592.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32768	E9PB61	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000331204.4	ALYREF-201	1095	257aa	ENSP00000331817.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86V81	NM_005782.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512673.1	ALYREF-003	441	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504015.2	ALYREF-004	254	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511412.1	ALYREF-002	533	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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