Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: PRDM9 ENSG00000164256

.

Description

PR domain containing 9 [Source:HGNC Symbol;Acc:13994]

Gene Synonyms

MEISETZ, MSBP3, PFM6, PRMD9, ZNF899

Location

Chromosome 5: 23,507,264-23,528,706 forward strand.

GRCh37:CM000667.1

About this gene

This gene has 2 transcripts (splice variants) and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296682.3	PRDM9-001	3691	894aa	ENSP00000296682.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43307	D2E453 D2KI85 D6RD68 Q9NQV7	NM_020227.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502755.1	PRDM9-003	558	100aa	ENSP00000425471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD68	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

.

Summary

.

.