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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PGGT1B ENSG00000164219

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Description

protein geranylgeranyltransferase type I, beta subunit [Source:HGNC Symbol;Acc:8895]

Gene Synonyms

BGGI, GGTI

Location

Chromosome 5: 114,546,527-114,598,569 reverse strand.

GRCh37:CM000667.1

About this gene

This gene has 5 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000419445.1	PGGT1B-001	2727	377aa	ENSP00000404676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4116	P53609	NM_005023.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379615.3	PGGT1B-002	903	300aa	ENSP00000368935.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P53609	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514178.1	PGGT1B-004	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000296642.4	PGGT1B-005	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503638.1	PGGT1B-003	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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