Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SH3RF1 ENSG00000154447

.

Description

SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:17650]

Gene Synonyms

KIAA1494, POSH, RNF142, SH3MD2

Location

Chromosome 4: 170,015,407-170,192,256 reverse strand.

GRCh37:CM000666.1

About this gene

This gene has 5 transcripts (splice variants) and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000284637.9	SH3RF1-001	5272	888aa	ENSP00000284637.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34099	D6RAL3 D6RHX5 Q7Z6J0	NM_020870.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510806.1	SH3RF1-005	591	79aa	ENSP00000421714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAL3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502315.1	SH3RF1-004	487	99aa	ENSP00000427585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAL3 D6RHX5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000511421.1	SH3RF1-002	1657	303aa	ENSP00000426418.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508685.1	SH3RF1-003	2020	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

.

Summary

.

.