Description
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:9082]
Gene Synonyms
LH2, TLH
Location
Chromosome 3: 145,787,227-145,881,440 reverse strand.
GRCh37:CM000665.1
About this gene
This gene has 10 transcripts (splice variants), 5 paralogues and is associated with 4 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000282903.5 | PLOD2-001 | 3732 | 758aa | ENSP00000282903.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3132 | E7ETU9 O00469 Q96AR9 Q96QU5 Q9Y6D3 | NM_182943.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000360060.3 | PLOD2-002 | 3665 | 737aa | ENSP00000353170.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3131 | O00469 Q96AR9 | NM_000935.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000461497.1 | PLOD2-005 | 3043 | 418aa | ENSP00000419354.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KWS3 Q96AR9 Q96QU5 Q9Y6D3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000494950.1 | PLOD2-003 | 2908 | 703aa | ENSP00000420094.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ETU9 Q96AR9 Q96QU5 Q9Y6D3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000469350.1 | PLOD2-006 | 723 | 229aa | ENSP00000419963.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JXZ0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000480704.1 | PLOD2-007 | 550 | 98aa | ENSP00000419880.1 | Nonsense mediated decay | F8WEW3 | - | - | |
| ENST00000478436.1 | PLOD2-004 | 3835 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000495700.1 | PLOD2-010 | 761 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460520.1 | PLOD2-008 | 530 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000475505.1 | PLOD2-009 | 480 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
