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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
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ID History
- Gene history

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Gene: UPF2 ENSG00000151461

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Description

UPF2 regulator of nonsense transcripts homolog (yeast) [Source:HGNC Symbol;Acc:17854]

Gene Synonyms

DKFZP434D222, HUPF2, KIAA1408, RENT2, smg-3

Location

Chromosome 10: 11,962,021-12,085,169 reverse strand.

GRCh37:CM000672.1

About this gene

This gene has 4 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356352.2	UPF2-001	5569	1272aa	ENSP00000348708.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7086	B4DHP3 Q9HAU5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397053.2	UPF2-201	5223	1272aa	ENSP00000380244.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7086	B4DHP3 Q9HAU5	NM_080599.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357604.5	UPF2-002	5193	1272aa	ENSP00000350221.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7086	B4DHP3 Q9HAU5	NM_015542.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460569.1	UPF2-004	640	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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