Gene: RBCK1 ENSG00000125826

Description

RanBP-type and C3HC4-type zinc finger containing 1 [Source:HGNC Symbol;Acc:15864]

Gene Synonyms

C20orf18, HOIL-1, HOIL1, RBCK2, RNF54, UBCE7IP3, XAP3, XAP4, ZRANB4

Location

Chromosome 20: 388,142-411,610 forward strand.

GRCh37:CM000682.1

About this gene

This gene has 13 transcripts (splice variants), 1 paralogue and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356286.5	RBCK1-010	2774	510aa	ENSP00000348632.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13000	Q5JWR1 Q9BYM8	NM_031229.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000353660.3	RBCK1-009	2511	468aa	ENSP00000254960.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12998	Q9BYM8	NM_006462.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000382181.2	RBCK1-006	2208	340aa	ENSP00000371616.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVK0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000475269.1	RBCK1-001	1200	105aa	ENSP00000417173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVJ6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000441733.1	RBCK1-013	961	116aa	ENSP00000387799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVJ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000400247.3	RBCK1-002	790	63aa	ENSP00000383106.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVJ5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000414880.1	RBCK1-007	765	255aa	ENSP00000393841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000411647.1	RBCK1-004	593	117aa	ENSP00000415080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JWR1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000382214.3	RBCK1-005	2752	336aa	ENSP00000371649.3	Nonsense mediated decay		G3XAG9 Q5JWR1	-	-
ENST00000415942.1	RBCK1-011	2613	272aa	ENSP00000405288.1	Nonsense mediated decay		B4DML5 Q5JWR1	-	-
ENST00000400245.3	RBCK1-003	1024	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465226.1	RBCK1-012	372	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468272.1	RBCK1-008	1486	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: RBCK1 ENSG00000125826

Summary