Description
RAB5C, member RAS oncogene family [Source:HGNC Symbol;Acc:9785]
Gene Synonyms
L1880, RAB5CL, RAB5L, RABL
Location
Chromosome 17: 40,276,994-40,307,035 reverse strand.
GRCh37:CM000679.1
View alleles of this gene on alternative sequences
About this gene
This gene has 9 transcripts (splice variants), 1 gene allele and 9 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000547517.1 | RAB5C-002 | 1167 | 249aa | ENSP00000447053.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58551 | F8VSF8 F8VVK3 F8VWU4 K7EIP6 P51148 | NM_001252039.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000393860.3 | RAB5C-201 | 1771 | 216aa | ENSP00000377440.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11419 | F8VSF8 F8VVK3 F8VWU4 K7EIP6 P51148 | NM_201434.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000346213.4 | RAB5C-001 | 1671 | 216aa | ENSP00000345689.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11419 | F8VSF8 F8VVK3 F8VWU4 K7EIP6 P51148 | NM_004583.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000550504.1 | RAB5C-004 | 583 | 91aa | ENSP00000449777.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VSF8 F8VWU4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551338.1 | RAB5C-006 | 560 | 150aa | ENSP00000467144.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ENY4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000552162.1 | RAB5C-005 | 551 | 124aa | ENSP00000449612.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VSF8 F8VVK3 F8VWU4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000550406.1 | RAB5C-008 | 500 | 74aa | ENSP00000448314.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VSF8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000546881.1 | RAB5C-007 | 608 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000550013.1 | RAB5C-003 | 555 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
