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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ANKRD54 ENSG00000100124

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Description

ankyrin repeat domain 54 [Source:HGNC Symbol;Acc:25185]

Gene Synonyms

LIAR

Location

Chromosome 22: 38,226,862-38,245,334 reverse strand.

GRCh37:CM000684.1

About this gene

This gene has 12 transcripts (splice variants) and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215941.4	ANKRD54-001	2184	300aa	ENSP00000215941.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13959	Q6NXT1	NM_138797.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406423.1	ANKRD54-010	954	180aa	ENSP00000384392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCX7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411961.2	ANKRD54-004	946	284aa	ENSP00000405782.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YTC9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609454.1	ANKRD54-013	825	107aa	ENSP00000477088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434930.1	ANKRD54-005	735	216aa	ENSP00000387507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JU48	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000458278.2	ANKRD54-006	623	208aa	ENSP00000412534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000424350.1	ANKRD54-003	597	90aa	ENSP00000393035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JX82	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413497.1	ANKRD54-008	794	178aa	ENSP00000391744.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000407117.2	ANKRD54-007	789	156aa	ENSP00000385180.2	Nonsense mediated decay		C9JX82 F8WB76	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498417.1	ANKRD54-002	2403	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000609706.1	ANKRD54-014	1140	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464849.1	ANKRD54-009	456	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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