Transcript: ENST00000397077.1 ATP2B2-005

Description

ATPase, Ca++ transporting, plasma membrane 2 [Source:HGNC Symbol;Acc:815]

Gene Synonyms

PMCA2, PMCA2a, PMCA2i

Location

Chromosome 3: 10,365,707-10,749,716 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 46 domains and features, is associated with 165282 variant alleles and maps to 1026 oligo probes.

Gene

This transcript is a product of gene ENSG00000157087.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360273.2	ATP2B2-202	8962	1243aa	ENSP00000353414.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33701	Q01814 Q4J696 Q4J699	NM_001001331.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000397077.1	ATP2B2-005	8964	1198aa	ENSP00000380267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2601	Q01814 Q4LE63	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000343816.4	ATP2B2-201	8920	1229aa	ENSP00000344677.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q01814 Q4J696	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000383800.4	ATP2B2-002	8900	1198aa	ENSP00000373311.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2601	Q01814 Q4LE63	NM_001683.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000352432.4	ATP2B2-001	8593	1243aa	ENSP00000324172.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33701	Q01814 Q4J696 Q4J699	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000452124.1	ATP2B2-003	4016	1099aa	ENSP00000414854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y7S3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460129.1	ATP2B2-004	9101	1154aa	ENSP00000424494.1	Nonsense mediated decay		Q01814	-	-
ENST00000467702.2	ATP2B2-006	907	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468426.1	ATP2B2-009	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480680.2	ATP2B2-008	1739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 19, Transcript length: 8,964 bps, Translation length: 1,198 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01814

CCDS

This transcript is a member of the Human CCDS set: CCDS2601

Version

ENST00000397077.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000276089 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000397077.1 ATP2B2-005

Summary