Transcript: ENST00000480680.2 ATP2B2-008

Description

ATPase, Ca++ transporting, plasma membrane 2 [Source:HGNC Symbol;Acc:815]

Gene Synonyms

PMCA2, PMCA2a, PMCA2i

Location

Chromosome 3: 10,429,568-10,547,268 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 51237 variant alleles and maps to 166 oligo probes.

Gene

This transcript is a product of gene ENSG00000157087.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397077.1	ATP2B2-005	8964	1198aa	ENSP00000380267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2601	Q01814 Q4LE63	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360273.2	ATP2B2-202	8962	1243aa	ENSP00000353414.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33701	Q01814 Q4J696 Q4J699	NM_001001331.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343816.4	ATP2B2-201	8920	1229aa	ENSP00000344677.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q01814 Q4J696	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383800.4	ATP2B2-002	8900	1198aa	ENSP00000373311.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2601	Q01814 Q4LE63	NM_001683.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352432.4	ATP2B2-001	8593	1243aa	ENSP00000324172.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33701	Q01814 Q4J696 Q4J699	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452124.1	ATP2B2-003	4016	1099aa	ENSP00000414854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y7S3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460129.1	ATP2B2-004	9101	1154aa	ENSP00000424494.1	Nonsense mediated decay		Q01814	-	-
ENST00000467702.2	ATP2B2-006	907	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468426.1	ATP2B2-009	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480680.2	ATP2B2-008	1739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,739 bps,

Version

ENST00000480680.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000340168 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000480680.2 ATP2B2-008

Summary