Transcript: ENST00000369842.4 EMD-001

Description

emerin [Source:HGNC Symbol;Acc:3331]

Gene Synonyms

EDMD, LEMD5, STA

Location

Chromosome X: 153,607,557-153,609,883 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 1423 variant alleles and maps to 409 oligo probes.

Gene

This transcript is a product of gene ENSG00000102119.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369842.4	EMD-001	1379	254aa	ENSP00000358857.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14745	P50402	NM_000117.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000369835.3	EMD-010	966	219aa	ENSP00000358850.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5HY57	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000428228.1	EMD-007	946	21aa	ENSP00000401081.1	Nonsense mediated decay		F8WEQ1	-	-
ENST00000492448.1	EMD-009	832	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486738.1	EMD-003	1284	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471965.1	EMD-004	800	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485261.1	EMD-006	792	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494443.1	EMD-005	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468294.1	EMD-008	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,379 bps, Translation length: 254 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P50402

CCDS

This transcript is a member of the Human CCDS set: CCDS14745

Version

ENST00000369842.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000080921 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000369842.4 EMD-001

Summary