Transcript: ENST00000485261.1 EMD-006

Description

emerin [Source:HGNC Symbol;Acc:3331]

Gene Synonyms

EDMD, LEMD5, STA

Location

Chromosome X: 153,607,764-153,609,315 forward strand.

About this transcript

This transcript has 3 exons, is associated with 952 variant alleles and maps to 395 oligo probes.

Gene

This transcript is a product of gene ENSG00000102119.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369842.4	EMD-001	1379	254aa	ENSP00000358857.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14745	P50402	NM_000117.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369835.3	EMD-010	966	219aa	ENSP00000358850.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5HY57	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428228.1	EMD-007	946	21aa	ENSP00000401081.1	Nonsense mediated decay		F8WEQ1	-	-
ENST00000492448.1	EMD-009	832	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486738.1	EMD-003	1284	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471965.1	EMD-004	800	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485261.1	EMD-006	792	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494443.1	EMD-005	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468294.1	EMD-008	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 792 bps,

Version

ENST00000485261.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000081633 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000485261.1 EMD-006

Summary