Human (GRCh37.p13)
Description

tropomyosin 1 (alpha) [Source:HGNC Symbol;Acc:12010]

Gene Synonyms

C15orf13, CMD1Y, CMH3, HTM-alpha, LVNC9, TMSA

Location
About this transcript

This transcript has 10 exons, is annotated with 17 domains and features, is associated with 7579 variant alleles and maps to 410 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000357980.4TPM1-0081800326aaENSP00000350667.4
 
Protein coding
Q6ZN40 -GENCODE basic
ENST00000358278.3TPM1-0181717284aaENSP00000351022.3
 
Protein coding
CCDS32263D9YZV5 H0YL42 P09493
NM_001018006.1GENCODE basic
ENST00000267996.7TPM1-0051670284aaENSP00000267996.7
 
Protein coding
CCDS32262P09493 NM_001018007.1GENCODE basic
ENST00000559397.1TPM1-0101655284aaENSP00000452879.1
 
Protein coding
CCDS58368H0YL42 P09493 NM_001018020.1GENCODE basic
ENST00000334895.5TPM1-0111637245aaENSP00000334624.4
 
Protein coding
CCDS32264D9YZV7 P09493 Q07413
NM_001018008.1GENCODE basic
ENST00000404484.4TPM1-0121568248aaENSP00000384315.4
 
Protein coding
H0YL42 H7BYY1 Q07413
-GENCODE basic
ENST00000288398.6TPM1-0011295284aaENSP00000288398.6
 
Protein coding
CCDS10181H0YL42 P09493 NM_000366.5GENCODE basic
ENST00000403994.3TPM1-0021049284aaENSP00000385107.3
 
Protein coding
CCDS45273D9YZV4 P09493 NM_001018005.1GENCODE basic
ENST00000560970.1TPM1-0031039265aaENSP00000453062.1
 
Protein coding
--CDS 5' incomplete
ENST00000559556.1TPM1-028977284aaENSP00000453941.1
 
Protein coding
CCDS58369P09493 NM_001018004.1GENCODE basic
ENST00000560959.1TPM1-014925275aaENSP00000453724.1
 
Protein coding
B7Z596 H0YL42 Q07413
-GENCODE basic
ENST00000559281.1TPM1-015851248aaENSP00000452658.1
 
Protein coding
H0YK48 Q07413 -GENCODE basic
ENST00000558910.1TPM1-02378233aaENSP00000452830.1
 
Protein coding
--CDS 5' incomplete
ENST00000317516.7TPM1-016738245aaENSP00000322577.7
 
Protein coding
F5H7S3 H0YL42 Q07413
-GENCODE basic
ENST00000561266.1TPM1-027671223aaENSP00000453955.1
 
Protein coding
--CDS 5' incomplete
ENST00000560615.1TPM1-022570108aaENSP00000453050.1
 
Protein coding
H0YL42 -CDS 3' incomplete
ENST00000560445.1TPM1-01948570aaENSP00000452999.1
 
Protein coding
H0YKZ6 -GENCODE basic
ENST00000560679.1TPM1-0242928aaENSP00000453136.1
 
Protein coding
--CDS 3' incomplete
ENST00000558264.1TPM1-017268792aaENSP00000452624.1
 
Nonsense mediated decay
H0YK20 --
ENST00000558347.1TPM1-0091525157aaENSP00000452887.1
 
Nonsense mediated decay
H0YKP3 --
ENST00000558544.1TPM1-013139949aaENSP00000453817.1
 
Nonsense mediated decay
H0YN06 Q07413 --
ENST00000561395.1TPM1-03367368aaENSP00000453092.1
 
Nonsense mediated decay
H0YL80 -CDS 5' incomplete
ENST00000561425.1TPM1-02058240aaENSP00000453324.1
 
Nonsense mediated decay
H0YLS7 --
ENST00000559831.1TPM1-029573142aaENSP00000452977.1
 
Nonsense mediated decay
H0YK20 H0YKX5 -CDS 5' incomplete
ENST00000560975.1TPM1-0072855No protein-
 
Retained intron
---
ENST00000558314.1TPM1-0061031No protein-
 
Retained intron
---
ENST00000561242.1TPM1-032673No protein-
 
Retained intron
---
ENST00000558400.1TPM1-030658No protein-
 
Retained intron
---
ENST00000558868.1TPM1-021653No protein-
 
Retained intron
---
ENST00000560131.1TPM1-026537No protein-
 
Retained intron
---
ENST00000558072.1TPM1-025525No protein-
 
Retained intron
---
ENST00000559108.1TPM1-031437No protein-
 
Retained intron
---
Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,049 bps, Translation length: 284 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45273

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09493

Version

ENST00000403994.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000417083 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.