Transcript: ENST00000234875.4 RPL22-001

Description

ribosomal protein L22 [Source:HGNC Symbol;Acc:10315]

Gene Synonyms

EAP, HBP15, HBP15/L22, L22

Location

Chromosome 1: 6,245,080-6,259,672 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 7012 variant alleles and maps to 700 oligo probes.

Gene

This transcript is a product of gene ENSG00000116251.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000234875.4	RPL22-001	2078	128aa	ENSP00000346088.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58	K7EJT5 K7ELC4 K7EMH1 K7EP65 K7ERI7 P35268 Q8WYP0	NM_000983.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000465335.1	RPL22-006	806	47aa	ENSP00000465313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497965.1	RPL22-002	786	95aa	ENSP00000468274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7ELC4 K7EMH1 K7EP65 K7ERI7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000462296.1	RPL22-008	600	48aa	ENSP00000467247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7EP65	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471204.1	RPL22-007	524	89aa	ENSP00000466502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7ELC4 K7EMH1 K7EP65	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465387.1	RPL22-005	508	79aa	ENSP00000466013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7ELC4 K7EP65	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484532.1	RPL22-004	449	53aa	ENSP00000465763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7EKS7 K7EP65	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000480661.1	RPL22-003	2279	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,078 bps, Translation length: 128 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35268

CCDS

This transcript is a member of the Human CCDS set: CCDS58

Version

ENST00000234875.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000002830 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000234875.4 RPL22-001

Summary