Transcript: ENST00000480661.1 RPL22-003

Description

ribosomal protein L22 [Source:HGNC Symbol;Acc:10315]

Gene Synonyms

EAP, HBP15, HBP15/L22, L22

Location

Chromosome 1: 6,246,635-6,259,623 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 6351 variant alleles and maps to 616 oligo probes.

Gene

This transcript is a product of gene ENSG00000116251.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000234875.4	RPL22-001	2078	128aa	ENSP00000346088.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58	K7EJT5 K7ELC4 K7EMH1 K7EP65 K7ERI7 P35268 Q8WYP0	NM_000983.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465335.1	RPL22-006	806	47aa	ENSP00000465313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497965.1	RPL22-002	786	95aa	ENSP00000468274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7ELC4 K7EMH1 K7EP65 K7ERI7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462296.1	RPL22-008	600	48aa	ENSP00000467247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7EP65	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471204.1	RPL22-007	524	89aa	ENSP00000466502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7ELC4 K7EMH1 K7EP65	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465387.1	RPL22-005	508	79aa	ENSP00000466013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7ELC4 K7EP65	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484532.1	RPL22-004	449	53aa	ENSP00000465763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJT5 K7EKS7 K7EP65	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480661.1	RPL22-003	2279	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,279 bps,

Version

ENST00000480661.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000002832 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000480661.1 RPL22-003

Summary